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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs75908370 chr5:96206617 C/T 3.31E-6 487 15.17 16.9 20.83 KM Plot
THCA rs7591472 chr2:201889751 C/T 0.000137 487 16.07 16.3 4.33 KM Plot
THCA rs75921373 chr6:26191843 C/T 2.3E-8 488 15.63 16.8 4.75 KM Plot
THCA rs75935068 chr1:91731756 T/C 5.31E-8 484 15.83 16.97 19.32 KM Plot
THCA rs75961601 chr2:48058924 A/C 1.14E-7 487 15.3 17.93 8.27 KM Plot
THCA rs7596838 chr2:229536 C/A 5.59E-12 486 15.97 15.3 20.63 KM Plot
THCA rs7597440 chr2:201842010 G/A 0.000137 487 16.07 16.3 4.33 KM Plot
THCA rs75981623 chr10:73792348 G/T 4.7E-8 470 16.33 14.92 14 KM Plot
THCA rs76014758 chr6:24420778 G/T 5.55E-15 488 16.37 14.85 11.07 KM Plot
THCA rs76018044 chr7:16461509 T/C 1.54E-10 477 15.13 17.28 18.82 KM Plot
THCA rs76030242 chr5:81299921 CAG/C 8.81E-5 485 15.9 16.33 17.97 KM Plot
THCA rs76039896 chr8:8385219 A/C 2.35E-10 484 16.48 15.15 8.3 KM Plot
THCA rs76042116 chr1:91791499 A/G 7.73E-6 490 15.65 17.03 17.77 KM Plot
THCA rs7604368 chr2:241524208 T/C 2.09E-11 484 15.9 15.42 19.27 KM Plot
THCA rs760462 chr21:46328099 T/C 0.0003 467 13.42 14.9 16.65 KM Plot